Packages / Debian 13 (Trixie) / gnu-r / r-bioc-genomicfiles
Package: r-bioc-genomicfiles (1.42.0+dfsg-2)
Maintainers:
External Resources:
Homepage: [bioconductor.org]
Distributed computing by file or by range
Other Packages Related to r-bioc-genomicfiles:
dep: r-api-4.0
Package not available
dep: r-api-bioc-3.20
Package not available
dep: [r-bioc-biocgenerics] (>= 0.11.2)
generic functions for Bioconductor
dep: [r-bioc-matrixgenerics]
S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects
dep: [r-bioc-genomicranges] (>= 1.31.16)
BioConductor representation and manipulation of genomic intervals
dep: [r-bioc-summarizedexperiment]
BioConductor assay container
dep: [r-bioc-biocparallel] (>= 1.1.0)
BioConductor facilities for parallel evaluation
dep: [r-bioc-rsamtools] (>= 1.17.29)
GNU R binary alignment (BAM), variant call (BCF), or tabix file import
dep: [r-bioc-rtracklayer] (>= 1.25.3)
GNU R interface to genome browsers and their annotation tracks
dep: [r-bioc-genomicalignments] (>= 1.7.7)
BioConductor representation and manipulation of short genomic alignments
dep: [r-bioc-iranges]
GNU R low-level containers for storing sets of integer ranges
dep: [r-bioc-s4vectors] (>= 0.9.25)
BioConductor S4 implementation of vectors and lists
dep: [r-bioc-variantannotation] (>= 1.27.9)
BioConductor annotation of genetic variants
dep: [r-bioc-genomeinfodb]
BioConductor utilities for manipulating chromosome identifiers
sug: [r-bioc-biocstyle]
standard styles for vignettes and other Bioconductor documents
sug: [r-cran-runit]
GNU R package providing unit testing framework
sug: [r-bioc-genefilter]
methods for filtering genes from microarray experiments
sug: [r-bioc-snpstats]
BioConductor SnpMatrix and XSnpMatrix classes and methods
sug: [r-cran-knitr]
GNU R package for dynamic report generation using Literate Programming
sug: [r-bioc-biostrings]
GNU R string objects representing biological sequences
Download r-bioc-genomicfiles
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 530 KiB | 785 KiB | [list of files] |
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Field source: Debian 13 (Trixie) main amd64 revision trixie-main-amd64:3ab4e811cf4f3e5a335d382c58cc19d85f1abe7a4ef4689160ca1f637fa0e9b3